MSTP students graduating in the past five years published an average of 5.3 papers per student, 2.7 first author papers per student. Thus, the students were highly productive in their thesis research. 48% of these papers involved collaborations between the laboratories of two or more Einstein faculty members. This demonstrates the highly collaborative nature of the Einstein faculty.
Selverian CN, Monticelli SR, Jaleta YM, Lasso G, DeMouth ME, Meola A, Berrigan J, Batchelor TG, Battini L, Guardado-Calvo P, Herbert AS, Chandran K, Meyerowitz E, Miller EH. MPXV Infection Stimulates a More Robust and Durable Neutralizing Antibody Response Compared to MVA-BN Vaccination. J Infect Dis. 2024 Oct 18:jiae515. doi: 10.1093/infdis/jiae515. Epub ahead of print. PMID: 39422181.
Tong K, Hernandez EM, Basore K, Fremont DH, Lai JR. Chikungunya virus E2 B domain nanoparticle immunogen elicits homotypic neutralizing antibody in mice. Vaccine. 2024 Oct 15;42(26):126405. doi: 10.1016/j.vaccine.2024.126405. Epub ahead of print. PMID: 39413488.
Rajagopalan S, Rourke AK, Asare E, Kohlerschmidt DJ, Das L, Ngema SL, Mulholland CV, Vilchèze C, Mahalingam V, Moodley S, Truebody B, Mackenzie J, Steyn AJC, Perumal R, Berney M, Larsen MH, O'Donnell MR, Escuyer VE, Jacobs WR Jr. Engineered Mycobacteriophage TM4::GeNL Rapidly Determines Bedaquiline, Pretomanid, Linezolid, Rifampicin, and Clofazimine Sensitivity in Mycobacterium tuberculosis Clinical Isolates. J Infect Dis. 2024 Oct 16:jiae438. doi: 10.1093/infdis/jiae438. Epub ahead of print. PMID: 39412357.
Bell BI, Velten C, Pennock M, Kang M, Tanaka KE, Selvaraj B, Bookbinder A, Koba W, Vercellino J, English J, Małachowska B, Pandey S, Duddempudi PK, Yang Y, Shajahan S, Hasan S, Choi JI, Simone CB 2nd, Yang WL, Tomé WA, Lin H, Guha C. Whole Abdominal Pencil Beam Scanned Proton FLASH Increases Acute Lethality. Int J Radiat Oncol Biol Phys. 2024 Sep 18:S0360-3016(24)03327-3. doi: 10.1016/j.ijrobp.2024.09.006. Epub ahead of print. PMID: 39299552.
Dalla E, Papanicolaou M, Park MD, Barth N, Hou R, Segura-Villalobos D, Valencia Salazar L, Sun D, Forrest ARR, Casanova-Acebes M, Entenberg D, Merad M, Aguirre-Ghiso JA. Lung-resident alveolar macrophages regulate the timing of breast cancer metastasis. Cell. 2024 Oct 4:S0092-8674(24)01034-1. doi: 10.1016/j.cell.2024.09.016. Epub ahead of print. PMID: 39378878.
Roske C, Nguyen TNB, Schwartz JJ, Erulker A, Nie K, Xie H, Kim-Schulze S, Ely BA, Tobe RH, Mowrey W, Gabbay V. Immunological correlates of suicidality among adolescents with internalizing symptoms. Brain Behav Immun Health. 2024 Sep 16;41:100866. doi: 10.1016/j.bbih.2024.100866. PMID: 39350953; PMCID: PMC11439560.
Bell BI, Velten C, Pennock M, Kang M, Tanaka KE, Selvaraj B, Bookbinder A, Koba W, Vercellino J, English J, Małachowska B, Pandey S, Duddempudi PK, Yang Y, Shajahan S, Hasan S, Choi JI, Simone CB 2nd, Yang WL, Tomé WA, Lin H, Guha C. Whole abdominal pencil beam scanned proton FLASH increases acute lethality. Int J Radiat Oncol Biol Phys. 2024 Sep 17:S0360-3016(24)03327-3. doi: 10.1016/j.ijrobp.2024.09.006. Epub ahead of print. PMID: 39299552.
Taylor SJ, Stauber J, Bohorquez O, Tatsumi G, Kumari R, Chakraborty J, Bartholdy BA, Schwenger E, Sundaravel S, Farahat AA, Wheat JC, Goldfinger M, Verma A, Kumar A, Boykin DW, Stengel KR, Poon GMK, Steidl U. Pharmacological restriction of genomic binding sites redirects PU.1 pioneer transcription factor activity. Nat Genet. 2024 Sep 18. doi: 10.1038/s41588-024-01911-7. Epub ahead of print. PMID: 39294495.
Reynolds CA, Pelka S, Gjergjova F, Tasset I, Khawaja RR, Lindenau K, Krause GJ, Gavathiotis E, Cuervo AM, Macian F. Restoration of LAMP2A expression in old mice leads to changes in the T cell compartment that support improved immune function. Proc Natl Acad Sci U S A. 2024 Sep 17; 121(38):e2322929121.
Flamholz ZN, Li C, Kelly L. Improving viral annotation with artificial intelligence. mBio. 2024 Oct 16; 15(10):e0320623.
MacArthur IC, Ma L, Huang CY, Bhavsar H, Suzuki M, Dawlaty MM. Developmental DNA demethylation is a determinant of neural stem cell identity and gliogenic competence.Sci Adv. 2024 Aug 30; 10(35):eado5424.
Ueda K, Chin SS, Sato N, Nishikawa M, Yasuda K, Miyasaka N, Bera BS, Chorro L, Doña-Termine R, Koba WR, Reynolds D, Steidl UG, Lauvau G, Greally JM, Suzuki M. Prenatal vitamin D deficiency exposure leads to long-term changes in immune cell proportions. Sci Rep. 2024 Aug 27; 14(1):19899.
Nuqui X, Casalino L, Zhou L, Shehata M, Wang A, Tse AL, Ojha AA, Kearns FL, Rosenfeld MA, Miller EH, Acreman CM, Ahn SH, Chandran K, McLellan JS, Amaro RE. Simulation-driven design of stabilized SARS-CoV-2 spike S2 immunogens. Nat Commun. 2024 Aug 27; 15(1):7370.
Lipton ML, Fleysher R, Song JY, Ye K, Zimmerman ME, Lipton RB, Daily JP. Brain effects of mild COVID-19 in healthy young adults: A pilot study. Heliyon. 2024 Jul 18; 10(15):e34764.
Sharma R, Amdare NP, Ghosh A, Schloss J, Sidney J, Garforth SJ, Lopez Y, Celikgil A, Sette A, Almo SC, DiLorenzo TP. Structural and biochemical analysis of highly similar HLA-B allotypes differentially associated with type 1 diabetes. J Biol Chem. 2024 Aug 20:107702. Epub ahead of print.
Muñoz Perez N, Pensabene JM, Galbo PM Jr, Sadeghipour N, Xiu J, Moziak K, Yazejian RM, Welch RL, Bell WR, Sengupta S, Aulakh S, Eberhart CG, Loeb DM, Eskandar E, Zheng D, Zang X, Martin AM. VISTA emerges as a promising target against immune evasion mechanisms in medulloblastoma. Cancers (Basel). 2024 Jul 24; 16(15):2629.
Pecorari IL, Reynolds JA, Agarwal V. The relationship between race, social vulnerability index, and clinical follow-up after surgical resection of pituitary tumors. World Neurosurg. 2024 Aug 6:S1878-8750(24)01362-7. Epub ahead of print.
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne AI, Wang A, Bakken RR, Mishra AK, Middlecamp M, Champney E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli NT, McLellan JS. Crimean-Congo hemorrhagic fever survivors elicit protective non-neutralizing antibodies that target 11 overlapping regions on glycoprotein GP38. Cell Rep. 2024 Jul 12; 43(7):114502.
Mulholland CV, Wiggins TJ, Cui J, Vilchèze C, Rajagopalan S,
Shultis MW, Reyes-Fernández EZ, Jacobs WR Jr, Berney M.
Propionate prevents loss of the PDIM virulence lipid in Mycobacterium
tuberculosis. Nat Microbiol. 2024 Jun; 9(6):1607-1618.
Nishimura CD, Corrigan D, Zheng XY, Galbo PM Jr, Wang S,
Liu Y, Wei Y, Suo L, Cui W, Mercado N, Zheng D, Zhang CC, Zang X. TOP CAR
with TMIGD2 as a safe and effective costimulatory domain in CAR cells
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Rosean S*, Sosa EA*, O'Shea D, Raj SM, Seoighe C, Greally
JM. Regulatory landscape enrichment analysis (RLEA): a computational
toolkit for non-coding variant enrichment and cell type prioritization.
BMC Bioinformatics. 2024 May 7; 25(1):179. (*contributed
equally).
Su H, Mueller A, Goldstein H. Recent advances on anti-HIV
chimeric antigen receptor-T-cell treatment to provide sustained HIV
remission. Curr Opin HIV AIDS. 2024 May 2. doi:
10.1097/COH.0000000000000858. Epub ahead of print.
Vercellino J, Małachowska B, Kulkarni S, Bell BI,
Shajahan S, Shinoda K, Eichenbaum G, Verma AK, Ghosh SP, Yang WL, Frenette
PS, Guha C. Thrombopoietin mimetic stimulates bone marrow vascular and
stromal niches to mitigate acute radiation syndrome.
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Reynolds JA, Pecorari IL, Ledet A,
Agarwal V. High-Grade Glioma Recurrence Is Delayed in Hispanic Patients
despite Severe Social Vulnerability: A Retrospective Cohort Study.
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Bae AJ, Ferger R, JL. Peña. Auditory competition and
coding of relative stimulus strength across midbrain space maps of Barn
Owls. J Neurosci. 2024 Apr 25:e2081232024.
Kreutzer AG*, Malonis RJ*, Parrocha CMT,
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JS. Generation and Study of Antibodies against Two Triangular Trimers
Derived from Aβ. Pept Sci (Hoboken). 2024 Mar; 116(2):e24333.
Piszczatowski RT, Buelow H, Steidl U. Heparan Sulfates
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Reynolds J, Huang M, Li Y, Meineck M, Moeckel T,
Weinmann-Menke J, Mohan C, Schwarting A, Putterman C. Constitutive
knockout of interleukin-6 ameliorates memory deficits and entorhinal
astrocytosis in the MRL/lpr mouse model of neuropsychiatric lupus.
J Neuroinflammation. 2024 Apr 10; 21(1):89.
Yheskel M, Hatch HAM, Pedrosa E, Terry
BK, Siebels AA, Zheng XY, Blok LER, Fencková M, Sidoli S, Schenck A, Zheng
D, Lachman HM, Secombe J. KDM5-mediated transcriptional activation of
ribosomal protein genes alters translation efficiency to regulate
mitochondrial metabolism in neurons. Nucleic Acids Res. 2024 Apr
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O'Leary K, Zheng D. Metacell-based differential
expression analysis identifies cell type specific temporal gene response
programs in COVID-19 patient PBMCs. NPJ Syst Biol Appl. 2024 Apr
5; 10(1):36.
Yu X, Benitez G, Wei PT, Krylova SV, Song Z, Liu L, Zhang
M, Xiaoli AM, Wei H, Chen F, Sidoli S, Yang F, Shinoda K, Pessin JE, Feng
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pyroptosis pathway. Nat Commun. 2024 Apr 2; 15(1):2856.
Eligulashvili A, Darrell M, Gordon M, Jerome W, Fiori KP,
Congdon S, Duong TQ. Patients with unmet social needs are at higher risks
of developing severe long COVID-19 symptoms and neuropsychiatric sequela.
Sci Rep. 2024 Apr 2; 14(1):7743.
Moore E, Bharrhan S, Rao DA, Macian F, Putterman C.
Characterisation of choroid plexus-infiltrating T cells reveals novel
therapeutic targets in murine neuropsychiatric lupus.
Ann Rheum Dis. 2024 Mar 26:ard-2023-224689.
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne
AI, Wang A, Bakken RR, Mishra A, Middlecamp M, Champney
E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama
JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli
NT, McLellan JS. Crimean-Congo Hemorrhagic Fever Survivors Elicit
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6:2024.03.02.583110.
Hsieh CL, Leist SR, Miller EH, Zhou L, Powers JM, Tse AL,
Wang A, West A, Zweigart MR, Schisler JC, Jangra RK,
Chandran K, Baric RS, McLellan JS. Prefusion-stabilized SARS-CoV-2 S2-only
antigen provides protection against SARS-CoV-2 challenge.
Nat Commun. 2024 Feb 20; 15(1):1553.
Williams DKA, Christophers B, Keyes T, Kumar R,
Granovetter MC, Adigun A, Olivera J, Pura-Bryant J,
Smith C, Okafor C, Shibre M, Daye D, Akabas MH.
Sociodemographic factors and research experience impact MD-PhD program
acceptance. JCI Insight. 2024 Feb 8; 9(3):e176146.
Fooksman DR, Jing Z, Park R. New insights into the
ontogeny, diversity, maturation and survival of long-lived plasma cells.
Nat Rev Immunol. 2024 Feb 8. doi: 10.1038/s41577-024-00991-0.
Epub ahead of print.
Flamholz ZN, Biller SJ, Kelly L. Large language models
improve annotation of prokaryotic viral proteins.
Nat Microbiol. 2024 Feb; 9(2):537-549.
Fluss R, Lo Bu R, Kobets AJ, Gomez JA. The complex
treatment paradigms for concomitant tethered cord and scoliosis:
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Bera BS, Thompson TV, Sosa E, Nomaru H,
Reynolds D, Dubin RA, Maqbool SB, Zheng D, Morrow BE, Greally JM, Suzuki
M. An optimized approach for multiplexing single-nuclear ATAC-seq using
oligonucleotide-conjugated antibodies.
Epigenetics Chromatin. 2023 Apr 28; 16(1):14. doi:
10.1186/s13072-023-00486-7.
Pierce CA, Loh LN, Steach HR, Cheshenko N,
Preston-Hurlburt P, Zhang F, Stransky S, Kravets L, Sidoli S, Philbrick
WM, Nassar MN, Krishnaswamy S, Herold KC, Herold BC. HSV-2 triggers
upregulation of MALAT1 in CD4+ T cells and promotes HIV latency reversal.
J Clin Invest. 2023 Apr 20:e164317. doi: 10.1172/JCI164317. Epub
ahead of print.
Yang Y, Kang M, Chen CC, Hu L, Yu F, Tsai P, Huang S, Liu J, Turner R,
Shen B, Hasan S, Chhabra AM, Choi JI, Bell B, Pennock M,
Tome WA, Guha C, Simone CB 2nd, Lin H. Commissioning a 250 MeV research
beamline for proton FLASH radiotherapy preclinical experiments.
Med Phys. 2023 Mar 17. doi: 10.1002/mp.16364. Epub ahead of
print.
Krylova SV, Glickman S, Kalam A, Chemakin K, Yi J,
Forrester L, Mishall P, Pinkas A. Hilar Abnormality in the Left Lung: Left
Pulmonary Artery Posterior to the Left Mainstem Bronchus.
Int Med Case Rep J. 2023 Mar 10; 16:135-139.
Charney MF, Ye KQ, Fleysher R, DeMessie B, Stewart WF,
Zimmerman ME, Kim M, Lipton RB, Lipton ML. Age of first exposure to soccer
heading: Associations with cognitive, clinical, and imaging outcomes in
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Charney MF, Ye KQ, Fleysher R, DeMessie B, Stewart WF,
Zimmerman ME, Kim M, Lipton RB, Lipton ML. Age of first exposure to soccer
heading: Associations with cognitive, clinical, and imaging outcomes in
the Einstein Soccer Study. Front Neurol. 2023 Feb 9; 14:1042707.
Yheskel M, Sidoli S, Secombe J. Proximity labeling
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Romano JD, Mayoral J, Guevara RB, Rivera-Cuevas Y,
Carruthers VB, Weiss LM, Coppens I. Toxoplasma scavenges mammalian host
organelles through the usurpation of host ESCRT-III and Vps4.
J Cell Sci. 2023 Jan 31:jcs.260159. doi: 10.1242/jcs.260159.
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Reynolds JA, Putterman C. Progress and unmet needs in
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J Autoimmun.2023 Jan 29:102999. doi: 10.1016/j.jaut.2023.102999.
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Novaj A, Engel MG, Wang R, Mao K, Xue X, Amir Y, Atzmon
G, Huffman DM. Dietary Walnuts Preserve Aspects of Health Span and Alter
the Hippocampal Lipidome in Aged High-Fat Diet-Fed Mice.
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Aaron T, Laudermilch E, Benet Z, Ovando LJ, Chandran K,
Fooksman D. TNF-α Limits Serological Memory by Disrupting the Bone Marrow
Niche. J Immunol.2023 Jan 11:ji2200053. doi:
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Krylova SV, Feng D. The Machinery of Exosomes:
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Cui J, Zhang C, Lee JE, Bartholdy BA, Yang D, Liu Y, Erler P, Galbo PM Jr,
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Eligulashvili A, Darrell M, Miller C, Lee J, Congdon S,
Lee JS, Hsu K, Yee J, Hou W, Islam M, Duong TQ. COVID-19 Patients in the
COVID-19 Recovery and Engagement (CORE) Clinics in the Bronx.
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Song JY, Delbourgo Patton C, Friedman R, Mahajan LS,
Nordlicht R, Sayed R, Lipton ML. Hormonal Contraceptives and the Brain: A
Systematic Review on 60 years of Neuroimaging, EEG, and Biochemical
Studies in Humans and Animals. Front Neuroendocrinol. 2022 Dec
25:101051. doi: 10.1016/j.yfrne.2022.101051. Epub ahead of print.
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(*contributed equally)
Wolfson SJ, Hitchings R, Peregrina K, Cohen Z,
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Cold Spring Harb Mol Case Stud. 2022 Jul 13:mcs.a006211. doi:
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Myer PA, Kim H, Blümel AM, Finnegan E, Kel A,
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RA, Floratos A, Das S. Master Transcription Regulators and Transcription
Factors Regulate Immune-Associated Differences Between Patients of African
and European Ancestry With Colorectal Cancer.
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Malonis RJ, Georgiev GI, Haslwanter D, VanBlargan
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Moore E, Huang MW, Reynolds CA, Macian F,
Putterman C. Choroid plexus- infiltrating T cells drive murine
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Lundy K, Greally JF, Essilfie-Bondzie G, Olivier JB,
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