Kauffman KM, Hussain FA, Yang J, Arevalo P, Brown JM, Chang WK, VanInsberghe D, Elsherbini J, Sharma RS, Cutler MB, Kelly L*, Polz MF*. A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria. Nature. 2018 Feb 1 554(7690):118-122. doi: 10.1038/nature25474. (*=co-corresponding author)
Guthrie L, Gupta S, Daily J, Kelly L. Human microbiome signatures of differential colorectal cancer drug metabolism. NPJ Biofilms Microbiomes. 2017 Nov 1 3:27. doi: 10.1038/s41522-017-0034-1. eCollection 2017. PubMed PMID:29104759 PubMed Central PMCID: PMC5665930.
Kelly L, Ding H, Huang KH, Osburne MS, Chisholm SW. Genetic diversity in cultured and wild marinecyanomyoviruses reveals phosphorus stress as a strong selective agent. ISME J. 2013 May 9. doi:10.1038/ismej.2013.58.
Kelly L†, Huang KH†, Ding H, Chisholm SW. ProPortal: A resource for integrated systems biology of Prochlorococcus and its phage. Nucleic Acids Res. 2012 Jan;40(Database issue):D632-40.
Li B†, Sher D†, Kelly L, Shi Y, Huang K, Knerr PJ, Joewono I, Rusch D, Chisholm SW, van der Donk WA. Catalytic promiscuity in the biosynthesis of cyclic peptide secondary metabolites in planktonic marine cyanobacteria. Proc Natl Acad Sci U S A. 2010 Jun 8 107(23):10430-5. doi: 10.1073/pnas.0913677107.
Thompson LR†, Zeng Q†, Kelly L, Huang KH, Singer AU, Stubbe J, Chisholm SW. Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism. Proc Natl Acad Sci U S A. 2011 Sep 27 108(39):E757-64. doi:10.1073/pnas.1102164108.
L. Kelly, R. Karchin, and A. Sali, “Protein interactions and disease phenotypes in the ABC transporter superfamily.,” Pac Symp Biocomput, 2007.
L. Kelly, U. Pieper, N. Eswar, F. A. Hays, M. Li, Z. Roe-Zurz, D. L. Kroetz, K. M. Giacomini, R. M. Stroud, and A. Sali, “A survey of integral alpha-helical membrane proteins,” J Struct Funct Genomics, vol. 10, no. 4, pp. 269–280, Dec. 2009.
L. Kelly†, H. Fukushima†, R. Karchin, J. M. Gow, L. W. Chinn, U. Pieper, M. R. Segal, D. L. Kroetz, and A. Sali, “Functional hot spots in human ATP-binding cassette transporter nucleotide binding domains.,” Protein Sci, vol. 19, no. 11, pp. 2110–2121, Nov. 2010.